BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018D05SP1|AL427306
(912 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1393 1725 0.0
>3x_Contig1393
Length = 6980
Score = 1725 bits (866), Expect = 0.0
Identities = 894/908 (98%)
Strand = Plus / Minus
Query: 5 acggtactgcattaccacagactcctgaaagagctatcactaaagatttgatagactcag 64
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6967 acggtactgacttaccacagactcctgaaagagctatcactaaagatttgatagactcag 6908
Query: 65 cgacaaaagaagaacagccaaaaattcatactgatctaagcgttaccaaagaagctgttg 124
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6907 cgacagaagaagaacagccaaaaattcatactgatctaagcgttaccaaagaagctgttg 6848
Query: 125 aacaaaagatcgaccttgattcaaagcaagtggtaraaaaagaacacgttattcttacac 184
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 6847 aacaaaagatcgaccttgattcaaagcaagtggtagaagaagaacacgttattcttacac 6788
Query: 185 atcagaaggaagttacttctttgccagatgaaacgattaatgccgagaaggaaactgaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6787 atcagaaggaagttacttctttgccagatgaaacgattaatgccgagaaggaaactgaca 6728
Query: 245 aggaatctctcaaaaaagcagagcataacacatctaaagtagatattccggattcaaaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6727 aggaatctctcaaaaaagcagagcataacacatctaaagtagatattccggattcaaaag 6668
Query: 305 aaaaggctcttcctggcaacgatggtgtccaggaaactatagttgaaaaagtggttgatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6667 aaaaggctcttcctggcaacgatggtgtccaggaaactatagttgaaaaagtggttgatg 6608
Query: 365 aagaggaacatcaaattgaagttcaagatcctatcgttgctgaacgtcaatcagaatctc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6607 aagaggaacatcaaattgaagttcaagatcctatcgttgctgaacgtcaatcagaatctc 6548
Query: 425 aaccggagtcccaaccggagtcccaaccggagacaggcaaaagcaccctcgctcagtata 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6547 aaccggagtcccaaccggagtcccaaccggagacaggcaaaagcaccctcgctcagtata 6488
Query: 485 tcaggtccgctaatccagaactccagagagttaatgaggaggatgctcttgttaccccta 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6487 tcaggtccgctaatccagaactccagagagttaatgaggaggatgctcttgttaccccta 6428
Query: 545 agattccattagaaaakactccttcacctataawatccgcaatgaagaaaacaaaccaca 604
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 6427 agattccattagaaaagactccttcacctataaaatccgcaatgaagaaaacaaaccaca 6368
Query: 605 acagccaacaacttcaacaacaatctcaagcttcaagcgcatatctgtctttaacaacaa 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6367 acagccaacaacttcaacaacaatctcaagcttcaagcgcatatctgtctttaacaacaa 6308
Query: 665 aggaaaacactaggttaaatgcgccactttctcacgaaagtttgagagaaaccgccagca 724
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 6307 aggaaaacactaggttaaatgcgcaactttctcacgaaagtttgagagaaaccgccagca 6248
Query: 725 aacaacaagcacaaaatcaataccgaagacagcaacagcaaaaccagcagcctctagctc 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6247 aacaacaagcacaaaatcaataccgaagacagcaacagcaaaaccagcagcctctagctc 6188
Query: 785 ckaagagaaaktctcaaagaccgcmatcaatgatggctcaaagagttaatggtgatagac 844
| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 6187 ctaagagaaattctcaaagaccgcaatcaatgatggctcaaagagttaatggtgatagac 6128
Query: 845 gttctttcatgcagaataattccggtgttgcttcccctcgcgatgctaaacstaaaagtg 904
|||||||||||||||||||||||||||||||||||||||||||||||| || || |||||
Sbjct: 6127 gttctttcatgcagaataattccggtgttgcttcccctcgcgatgctagacctagaagtg 6068
Query: 905 tcgtaggg 912
||||||||
Sbjct: 6067 tcgtaggg 6060
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6835
Number of Sequences: 1807
Number of extensions: 6835
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 912
length of database: 10,358,551
effective HSP length: 16
effective length of query: 896
effective length of database: 10,329,639
effective search space: 9255356544
effective search space used: 9255356544
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)